Construction of physical map of the hexaploid wheat D genome using the chromosome-based approach
Public support
Provider
Ministry of Education, Youth and Sports
Programme
COST
Call for proposals
COST 6 (SMSM2008OC3)
Main participants
—
Contest type
VS - Public tender
Contract ID
1146/2010-32
Alternative language
Project name in Czech
Konstrukce fyzických map D genomu pšenice pomocí chromozómové strategie
Annotation in Czech
Budou připraveny fyzické mapy chromozómů 1D, 4D a 6D hexaploidní pšenice. Tyto mapy umožní efektivní sekvenování polyploidního genomu této plodiny a izolaci agronomicky významných genů.
Scientific branches
R&D category
ZV - Basic research
CEP classification - main branch
EB - Genetics and molecular biology
CEP - secondary branch
EF - Botany
CEP - another secondary branch
GE - Plant cultivation
OECD FORD - equivalent branches <br>(according to the <a href="http://www.vyzkum.cz/storage/att/E6EF7938F0E854BAE520AC119FB22E8D/Prevodnik_oboru_Frascati.pdf">converter</a>)
10603 - Genetics and heredity (medical genetics to be 3)<br>10604 - Reproductive biology (medical aspects to be 3)<br>10605 - Developmental biology<br>10608 - Biochemistry and molecular biology<br>10609 - Biochemical research methods<br>10611 - Plant sciences, botany<br>10612 - Mycology<br>30101 - Human genetics<br>40105 - Horticulture, viticulture<br>40106 - Agronomy, plant breeding and plant protection; (Agricultural biotechnology to be 4.4)
Completed project evaluation
Provider evaluation
V - Vynikající výsledky projektu (s mezinárodním významem atd.)
Project results evaluation
Within the framework of COST action FA0604 and in collaboration with laboratories of Prof. B.S. Gill (KSU, Manhattan) and Prof J. Dvořák (UC, Davis) BAC libraries were prepared from wheat chromosomes 1D, 4D and 6D. The libraries were used to assemble minimum tiling path representing the chromosomes. BAC contigs were integrated with physical map of Aegilops tauschii and anchored to genetic map.
Solution timeline
Realization period - beginning
Jan 1, 2008
Realization period - end
Jun 30, 2011
Project status
U - Finished project
Latest support payment
Feb 22, 2011
Data delivery to CEP
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data delivery code
CEP12-MSM-OC-U/01:1
Data delivery date
Jul 12, 2012
Finance
Total approved costs
2,553 thou. CZK
Public financial support
1,706 thou. CZK
Other public sources
847 thou. CZK
Non public and foreign sources
0 thou. CZK