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High throughput bacterial genome assembly and annotation techniques using genomic signal processing (GA17-01821S)
The project is focused on computational whole-genome analysis of bacteria using digital signal processing methods (DSP). As first, a new algorithm for genome assembly in the genome which is necessary for detection ...
IN - Informatika
- 2017 - 2021 •
- 5 555 tis. Kč •
- 5 483 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2017 - 31. 12. 2021
Uznané náklady
Podpora ze státního rozpočtu (99%)
Poskytovatel: Grantová agentura České republiky
Antibiotic resistance routes of dissemination, means of evolution and adaptation Incorporating WGS in the equation (NU20J-05-00033)
-threatening infections. In this project, molecular-epidemiological and genomic analysis genome sequencing and bioinformatics analysis will allow to identify specific to carbapenems in hospitals. Complex genomi...
Microbiology
- 2020 - 2023 •
- 9 370 tis. Kč •
- 9 370 tis. Kč •
- MZ
Řešení projektu: 1. 5. 2020 - 31. 12. 2023
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Ministerstvo zdravotnictví
Research of broad host-range mutants of staphylococcal bacteriophages (TA01010405)
of recent clinical S. aureus strains. Genomic analysis will be used to exclude presence of toxic genes in genomes of therapeutic phages. Genetic basis of host-range mutations will be determined by analysis of rest...
EE - Mikrobiologie, virologie
- 2011 - 2015 •
- 10 297 tis. Kč •
- 7 764 tis. Kč •
- TA ČR
Řešení projektu: 1. 1. 2011 - 31. 12. 2015
Uznané náklady
Podpora ze státního rozpočtu (75%)
Poskytovatel: Technologická agentura ČR
Analysis of interactions between polyvalent Twort-like therapeutic phage and its host Staphylococcus aureus (GA18-13064S)
knowledge of the molecular biological mechanisms of viral infection of bacterial cells genomics and structural studies. We propose to monitor the course of phage infection of host cells using transcriptome analysis, the st...
Microbiology
- 2018 - 2022 •
- 7 793 tis. Kč •
- 7 052 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2018 - 31. 12. 2022
Uznané náklady
Podpora ze státního rozpočtu (90%)
Poskytovatel: Grantová agentura České republiky
Integrated genome and proteome analysis of therapeutically important bacteriophages by combination of electrophoresis and mass spectrometry (GA203/03/0515)
It is expected that selected bacteriophages (bacterial viruses), or even their specific proteins and/or peptides can be used as new effective means to treat bacterial of suitable phages and their genome/proteome structure m...
CB - Analytická chemie, separace
- 2003 - 2005 •
- 7 442 tis. Kč •
- 3 890 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2003 - 1. 1. 2005
Uznané náklady
Podpora ze státního rozpočtu (52%)
Poskytovatel: Grantová agentura České republiky
Intramembrane proteases of rhomboid family – specificity, mechanism, and substrate identification as a key to their biological roles. (GAP305/11/1886)
to substrate identification we will use mutagenesis of model substrates, enzymatic analysis and X-ray crystallography to decipher specificity of representative bacterial rhomboids chosen based on phylogenetic and genomic <...
CE - Biochemie
- 2011 - 2015 •
- 3 819 tis. Kč •
- 3 819 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2011 - 13. 4. 2015
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Genome-based diagnostics and typing of coagulase-negative staphylococci from human clinical specimens (GA301/99/D075)
PFGE-macrorestriction analysis, hybridization techniques including ribotyping, PCR, and plasmid analysis, the genomic variability of these multiple-resistant strainsThe aim of the project is to make more accurate (on the b...
EB - Genetika a molekulární biologie
- 1999 - 2001 •
- 945 tis. Kč •
- 424 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 1999 - 1. 1. 2001
Uznané náklady
Podpora ze státního rozpočtu (45%)
Poskytovatel: Grantová agentura České republiky
Molecular analysis of complex genom of Pseudomonas syringae pathovars and design of DNA-chip for their parallel detection (GP522/07/P338)
Molecular biology techniques will be used for analysis of important will be used for creation of our bacterial collection. Genetic diversity among all isolates electrophoresis). The second one will also help to calculate aproximate ...
GF - Choroby, škůdci, plevely a ochrana rostlin
- 2007 - 2009 •
- 1 430 tis. Kč •
- 1 430 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2007 - 31. 12. 2009
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Unveiling life strategies of selected groups of planktonic Betaproteobacteria in relationship to carbon flow to higher trophic levels (GA13-00243S)
We propose investigations of life strategies related to genomic is available that facilitates examination of diversity in ecophysiologic and genomic traits new insights into distinct bacterial lifestyles are assumed, includ...
DA - Hydrologie a limnologie
- 2013 - 2017 •
- 11 405 tis. Kč •
- 11 405 tis. Kč •
- GA ČR
Řešení projektu: 1. 2. 2013 - 31. 12. 2017
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Analysis of soils suppressive to crop diseases in different agronomic contexts (8X20052)
1. To identify and compare soils based on disease suppressiveness properties 2. To isolate, sequence and analyze microorganisms from suppressive soils 3. Use plant metabolomics to study the implementation of control mechanisms......
Microbiology
- 2020 - 2022 •
- 94 tis. Kč •
- 94 tis. Kč •
- MŠMT
Řešení projektu: 1. 3. 2020 - 31. 12. 2022
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Ministerstvo školství, mládeže a tělovýchovy
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