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Investigation of plant repetitive DNA by bioinformatic analysis of next-generation sequencing data (OC10037)
DNA sequencing is one of the basic techniques of genome investigation. However, relatively low speed and high cost of sequencing projects employing traditional, clone-based Sanger sequencing represent limiting factors for i...
EB - Genetika a molekulární biologie
- 2010 - 2012 •
- 3 116 tis. Kč •
- 1 494 tis. Kč •
- MŠMT
Řešení projektu: 1. 5. 2010 - 31. 12. 2012
Uznané náklady
Podpora ze státního rozpočtu (48%)
Poskytovatel: Ministerstvo školství, mládeže a tělovýchovy
Real-time determination of infection threats from raw nanopore signals using machine learning techniques (GA23-05845S)
Nanopore sequencers represent the future of DNA sequencing. The main advantages are low acquisition cost, connectivity, easy samples extraction and sequencing library preparation. These attributes make nanopore sequenci...
Microbiology
- 2023 - 2025 •
- 9 491 tis. Kč •
- 9 491 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2023 - 31. 12. 2025
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Single cell techniques in whole genome sequencing of uncultivable pathogenic treponemes (GA17-25455S)
studies of pathogenic treponemes to produce a high quality whole genome sequences without gaps and/or ambiguities. Because of their importance, genome sequences need to include also paralogous and repetitive sequences. Gen...
EE - Mikrobiologie, virologie
- 2017 - 2019 •
- 9 857 tis. Kč •
- 9 566 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2017 - 31. 12. 2019
Uznané náklady
Podpora ze státního rozpočtu (97%)
Poskytovatel: Grantová agentura České republiky
Whole genome sequencing in genome and transcriptome analyses of Treponema pathogens (GAP302/12/0574)
) genomic sequencing of treponemal strains and ii) sequencing analyses of transcriptomes and identification of T. pallidum promoters. At least 10 pathogenic treponemes will be sequenced to obtain high quality genome seq...
EE - Mikrobiologie, virologie
- 2012 - 2016 •
- 10 673 tis. Kč •
- 10 673 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2012 - 31. 12. 2016
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Distribution and metric properties of number sequences and their applications (GAP201/12/2351)
and metric properties of number sequences or their families. In the area of distribution of the underlying sequences. The aim of the study will also be the interference between arithmetic characteristics (discrepancy, density etc.)...
BA - Obecná matematika
- 2012 - 2015 •
- 8 070 tis. Kč •
- 8 070 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2012 - 31. 12. 2015
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Grantová agentura České republiky
Whole genome sequencing and RNA sequencing - a tool for elucidation of the causes of rare types of hereditary neuropathies. (NV16-30206A)
massively parallel sequencing of a gene panel and whole exome sequencing (WES). The aim will use new possibilities and methods such as whole genome sequencing and RNA sequencing. Firstly, we will focus on four lar...
FH - Neurologie, neurochirurgie, neurovědy
- 2016 - 2019 •
- 5 850 tis. Kč •
- 5 850 tis. Kč •
- MZ
Řešení projektu: 1. 4. 2016 - 31. 12. 2019
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Ministerstvo zdravotnictví
Industrial research and development of new DNA technology for human diagnostics next generation sequencing and microRNA (EG15_018/0004701)
Industrial research and development of new DNA technology for human diagnostics: next generation sequencing and microRNA...
FS - Lékařská zařízení, přístroje a vybavení
- 2015 - 2020 •
- 19 337 tis. Kč •
- 2 141 tis. Kč •
- MPO
Řešení projektu: 29. 9. 2015 - 11. 6. 2020
Uznané náklady
Podpora ze státního rozpočtu (11%)
Poskytovatel: Ministerstvo průmyslu a obchodu
Sequence organization and evolution of plant satellite DNA (GA204/04/1207)
Highly repetitive, tandemly organized DNA sequences (satellite DNAs) make up, including those of model organisms selected for the genome sequencing projects. In fact, most of the gaps in the almost completed sequences of th...
EB - Genetika a molekulární biologie
- 2004 - 2006 •
- 5 471 tis. Kč •
- 3 585 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2004 - 1. 1. 2006
Uznané náklady
Podpora ze státního rozpočtu (66%)
Poskytovatel: Grantová agentura České republiky
A study of repetitive sequences in pea (Pisum sativum L.) (GP521/02/P007)
A study of repetitive sequences in pea (Pisum sativum L.) The aim will be retrieved fromphage pea genomic library using probes prepared from repetitive sequences. The sequences represent the most abundant repeats in pea wit...
EB - Genetika a molekulární biologie
- 2002 - 2004 •
- 1 026 tis. Kč •
- 672 tis. Kč •
- GA ČR
Řešení projektu: 1. 1. 2002 - 1. 1. 2004
Uznané náklady
Podpora ze státního rozpočtu (65%)
Poskytovatel: Grantová agentura České republiky
Sequence variants of the PKHD1 gene in patients with autosomal recessive polycystic kidney disease by next generation sequencing technology (NT13090)
Utilization of technology of next generation sequencing and other molecular genetic methods for PKHD1 gene analysis in patients with autosomal recessive polycystic kidney disease. Genotype-phenotype correlation. Establishment of molecular ge...
EB - Genetika a molekulární biologie
- 2012 - 2015 •
- 5 604 tis. Kč •
- 5 604 tis. Kč •
- MZ
Řešení projektu: 1. 4. 2012 - 31. 12. 2015
Uznané náklady
Podpora ze státního rozpočtu (100%)
Poskytovatel: Ministerstvo zdravotnictví
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