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DNA methylation validation methods: a coherent review with practical comparison

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00023736%3A_____%2F19%3A00012760" target="_blank" >RIV/00023736:_____/19:00012760 - isvavai.cz</a>

  • Alternative codes found

    RIV/00216208:11110/19:10400796

  • Result on the web

    <a href="https://doi.org/10.1186/s12575-019-0107-z" target="_blank" >https://doi.org/10.1186/s12575-019-0107-z</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1186/s12575-019-0107-z" target="_blank" >10.1186/s12575-019-0107-z</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    DNA methylation validation methods: a coherent review with practical comparison

  • Original language description

    Here, we present a practical overview of four commonly used validation methods for DNA methylation assessment: methylation specific restriction endonucleases (MSRE) analysis, pyrosequencing, methylation specific high-resolution DNA melting (MS-HRM) and quantitative methylation specific polymerase chain reaction (qMSP). Using these methods, we measured DNA methylation levels of three loci in human genome among which one was highly methylated, one intermediately methylated and one unmethylated. We compared the methods in terms of primer design demands, methods’ feasibility, accuracy, time and money consumption, and usability for clinical diagnostics.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    30205 - Hematology

Result continuities

  • Project

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2019

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Biological procedures online

  • ISSN

    1480-9222

  • e-ISSN

  • Volume of the periodical

    21

  • Issue of the periodical within the volume

    1

  • Country of publishing house

    GB - UNITED KINGDOM

  • Number of pages

    11

  • Pages from-to

    "art. no. 19"

  • UT code for WoS article

    000488472100001

  • EID of the result in the Scopus database

    2-s2.0-85073072577