SheepBam
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00027014%3A_____%2F24%3A10005925" target="_blank" >RIV/00027014:_____/24:10005925 - isvavai.cz</a>
Result on the web
<a href="https://github.com/KarelValis/SheepBam/tree/main" target="_blank" >https://github.com/KarelValis/SheepBam/tree/main</a>
DOI - Digital Object Identifier
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Alternative languages
Result language
angličtina
Original language name
SheepBam
Original language description
Bash command-line toolkit for the generation of compressed reference-aligned .bam files through the Burrows-Wheeler transform. Single-nucleotide Polymorphism (SNP) calling and indels view utilizing long-range amplicons Next-Generation Sequencing (NGS) data originated from the sheep genomic DNA.
Czech name
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Czech description
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Classification
Type
R - Software
CEP classification
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OECD FORD branch
40203 - Husbandry
Result continuities
Project
<a href="/en/project/QK1910082" target="_blank" >QK1910082: Addressing the problem of the occurrence of bacterial, protozoan and viral zoonotic agents in small ruminant breeds</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2024
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Internal product ID
binbam
Technical parameters
Bash command-line toolkit.
Economical parameters
Open source, LGPL3.
Owner IČO
00027014
Owner name
VÚŽV