SNPman: a program for genotype calling using run data from TaqMan allelic discrimination

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00064203%3A_____%2F11%3A7026" target="_blank" >RIV/00064203:_____/11:7026 - isvavai.cz</a>
Alternative codes found
RIV/00216208:11130/11:7026
Result on the web
<a href="http://bioinformatics.oxfordjournals.org/" target="_blank" >http://bioinformatics.oxfordjournals.org/</a>
DOI - Digital Object Identifier
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Result language
angličtina
Original language name
SNPman: a program for genotype calling using run data from TaqMan allelic discrimination
Original language description
The SNPman program calls the genotypes of single nucleotide polymorphisms (SNP) from TaqMan allelic discrimination assays. It utilizes the fluorescence data collected over the whole PCR run, rather than relying on the end point fluorescence measurementsthat is the basis of the genotype calling process in most software solutions sold with the real-time instruments. This inspection of run data facilitates genotype calls in difficult sample sets, especially in those containing various concentrations of DNA or inhibitors, as indicated by results of a reanalysis of 3738 genotyping samples. The program works with data from three different widely used PCR instruments.
Czech name
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Czech description
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Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
CE - Biochemistry
OECD FORD branch
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Project
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Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year
2011
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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