Molecular and Biological Analysis of Potato virus M (PVM) Isolates from the Czech Republic
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11310%2F15%3A10296577" target="_blank" >RIV/00216208:11310/15:10296577 - isvavai.cz</a>
Alternative codes found
RIV/61389030:_____/15:00451389 RIV/60109807:_____/15:#0000334
Result on the web
<a href="http://dx.doi.org/10.1111/jph.12334" target="_blank" >http://dx.doi.org/10.1111/jph.12334</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1111/jph.12334" target="_blank" >10.1111/jph.12334</a>
Alternative languages
Result language
angličtina
Original language name
Molecular and Biological Analysis of Potato virus M (PVM) Isolates from the Czech Republic
Original language description
The sequences of the 30-terminal region of four Czech Potato virus M isolates VIRUBRA 4/007, VIRUBRA 4/009, VIRUBRA 4/016 and VIRUBRA 4/035 were determined and compared with sequences of PVM isolates available in GenBank. Among the Czech isolates, VIRUBRA 4/007 and 4/016 as well as VIRUBRA 4/016 and 4/035 showed the highest nucleotide identity (93%). Isolates VIRUBRA 4/007, 4/016 and 4/035 were most similar to the PV0273 isolate from Germany and to the wild isolate from Russia. Interestingly, isolate VIRUBRA 4/009 significantly differed from the other three Czech isolates and was the only European isolate that showed the highest nucleotide identity with American isolates. Moreover, the PVM isolates from the Czech Republic and Germany differed in theirhost range. Phylogenetic analysis based on ORF5 coding for coat protein showed that the Czech isolates could be classified in two of the three groupings of the phylogenetic tree obtained. This is the first report on molecular and biologic
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EB - Genetics and molecular biology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/1M06030" target="_blank" >1M06030: Functional genomics and proteomics for crop improvement</a><br>
Continuities
S - Specificky vyzkum na vysokych skolach<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2015
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Journal of Phytopathology
ISSN
0931-1785
e-ISSN
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Volume of the periodical
163
Issue of the periodical within the volume
11-12
Country of publishing house
DE - GERMANY
Number of pages
5
Pages from-to
1031-1035
UT code for WoS article
000363730100020
EID of the result in the Scopus database
2-s2.0-84945127730