A plant biologists' guide to phylogenetic analysis of biological macromolecule sequences
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11310%2F16%3A10337580" target="_blank" >RIV/00216208:11310/16:10337580 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1007/s10535-016-0649-8" target="_blank" >http://dx.doi.org/10.1007/s10535-016-0649-8</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/s10535-016-0649-8" target="_blank" >10.1007/s10535-016-0649-8</a>
Alternative languages
Result language
angličtina
Original language name
A plant biologists' guide to phylogenetic analysis of biological macromolecule sequences
Original language description
Phylogenetic analysis has become a common step in characterization of gene and protein sequences. However, despite the availability of numerous affordable and more-or-less intuitive software tools, construction of biologically relevant, informative phylogenetic trees remains a process involving several critical steps that are inherently non-algorithmic, i.e., dependent on decisions made by the user. These steps involve, but are not limited to, setting the aims of the phylogenetic study, choosing sequences to be analyzed, and selecting methods employed in sequence alignment construction, as well as algorithms and parameters used to construct the actual phylogenetic tree. This review aims towards providing guidance for these decisions, as well as illustrating common pitfalls and problems occurring during phylogenetic analysis of plant gene sequences.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
ED - Physiology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/LO1417" target="_blank" >LO1417: Centre of Experimental Plant Biology of CU</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2016
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Biologia Plantarum
ISSN
0006-3134
e-ISSN
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Volume of the periodical
60
Issue of the periodical within the volume
4
Country of publishing house
NL - THE KINGDOM OF THE NETHERLANDS
Number of pages
9
Pages from-to
619-627
UT code for WoS article
000392128700002
EID of the result in the Scopus database
2-s2.0-84989172173