DNA barcoding of fungi: a case study using ITS sequences for identifying aquatic hyphomycete species

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F10%3A00046407" target="_blank" >RIV/00216224:14310/10:00046407 - isvavai.cz</a>

Result on the web

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DOI - Digital Object Identifier

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Result language

angličtina

Original language name

DNA barcoding of fungi: a case study using ITS sequences for identifying aquatic hyphomycete species

Original language description

Aquatic hyphomycetes are a polyphyletic group of fungi that play a crucial role in organic matter turnover in streams. They have been traditionally identified based on the morphology of conidia collected in stream water or obtained from leaves colonizedin nature upon aeration in the laboratory. Currently, a great effort in fungal taxonomy is being made at introducing a set of criteria based on comparisons of selected nucleotide sequences instead of or in addition to phenotypic characters. We examined the suitability of ITS1-5.8S-ITS2 rRNA gene region or its subregions (ITS1 and ITS2) to identify aquatic hyphomycetes and we therefore propose ITS1-5.8S-ITS2 rRNA gene as barcode for identifying species of aquatic hyphomycetes.

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EE - Microbiology, virology

OECD FORD branch

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Project

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Continuities

Z - Vyzkumny zamer (s odkazem do CEZ)

Publication year

2010

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Fungal Diversity

ISSN

1560-2745

e-ISSN

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Volume of the periodical

44

Issue of the periodical within the volume

1

Country of publishing house

CZ - CZECH REPUBLIC

Number of pages

11

Pages from-to

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UT code for WoS article

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EID of the result in the Scopus database

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