Experiments in Molecular Subtype Recognition Based on Histopathology Images
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F16%3A00093777" target="_blank" >RIV/00216224:14310/16:00093777 - isvavai.cz</a>
Result on the web
<a href="http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=7493474" target="_blank" >http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=7493474</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1109/ISBI.2016.7493474" target="_blank" >10.1109/ISBI.2016.7493474</a>
Alternative languages
Result language
angličtina
Original language name
Experiments in Molecular Subtype Recognition Based on Histopathology Images
Original language description
Molecular subtypes have been recently derived for various types of cancer, in an attempt to characterize the inter-tumoral heterogeneity. In this work we explore the possibility of constructing predictors for molecular subtypes based on histopathology images. For this, we introduce a novel 2-level bag-of-features method and we apply it to a collection of colorectal cancer samples. The resulting image features capture some relevant tumor morphology patterns and led to a classifier performing similarly to one constructed from features annotated by an expert pathologist. The significance of our results extends beyond subtype prediction since they demonstrate a possible approach to multimodal (histopathology and molecular) data mining and biomarker identification.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
<a href="/en/project/LO1214" target="_blank" >LO1214: Research Centre for Toxic Compounds in the Environment</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2016
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
2016 IEEE 13TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI)
ISBN
9781479923502
ISSN
1945-7928
e-ISSN
—
Number of pages
5
Pages from-to
1168-1172
Publisher name
IEEE
Place of publication
NEW YORK
Event location
Prague, CZECH REPUBLIC
Event date
Apr 13, 2016
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
000386377400276