Towards a Realistic Distribution of Cells in Synthetically Generated 3D Cell Populations

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F13%3A00066208" target="_blank" >RIV/00216224:14330/13:00066208 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1007/978-3-642-41184-7_44" target="_blank" >http://dx.doi.org/10.1007/978-3-642-41184-7_44</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/978-3-642-41184-7_44" target="_blank" >10.1007/978-3-642-41184-7_44</a>

Result language
angličtina
Original language name
Towards a Realistic Distribution of Cells in Synthetically Generated 3D Cell Populations
Original language description
In fluorescence microscopy, the proper evaluation of image segmentation algorithms is still an open problem. In the field of cell segmentation, such evaluation can be seen as a study of the given algorithm how well it can discover individual cells as a function of the number of them in an image (size of cell population), their mutual positions (density of cell clusters), and the level of noise. Principally, there are two approaches to the evaluation. One approach requires real input images and an expertthat verifies the segmentation results. This is, however, expert dependent and, namely when handling 3D data, very tedious. The second approach uses synthetic images with ground truth data to which the segmentation result is compared objectively. In this paper, we propose a new method for generating synthetic 3D images showing naturally distributed cell populations attached to microscope slide. Cell count and clustering probability are user parameters of the method.
Czech name
—
Czech description
—

Project
<a href="/en/project/GBP302%2F12%2FG157" target="_blank" >GBP302/12/G157: Dynamics and Organization of Chromosomes in the Cell Cycle and during Differentiation under Normal and Pathological Conditions</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2013
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Article name in the collection
17th International Conference on Image Analysys and Processing - ICIAP 2013
ISBN
9783642411830
ISSN
0302-9743
e-ISSN
—
Number of pages
10
Pages from-to
429-438
Publisher name
Springer-Verlag
Place of publication
Berlin, Heidelberg
Event location
Naples, Italy
Event date
Sep 11, 2013
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
000329811200044

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