Biochemical Space: A Framework for Systemic Annotation of Biological Models
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F14%3A00076022" target="_blank" >RIV/00216224:14330/14:00076022 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1016/j.entcs.2014.06.013" target="_blank" >http://dx.doi.org/10.1016/j.entcs.2014.06.013</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/j.entcs.2014.06.013" target="_blank" >10.1016/j.entcs.2014.06.013</a>
Alternative languages
Result language
angličtina
Original language name
Biochemical Space: A Framework for Systemic Annotation of Biological Models
Original language description
In this tool paper, we target the problem of unique annotation of organism-specific computational models presented in a public model database. In particular, we present Biochemical Space, a novel annotation methodology accompanied with a set of softwaretools that allow to create, manage and maintain the Biochemical Space content. The main idea behind is to create a transparent well-annotated reaction network of chemical entities and elemental reactions onto which the mathematical models are projected.For a given organism, the Biochemical Space represents a unifying platform for understanding of the related biological processes.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
IN - Informatics
OECD FORD branch
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Result continuities
Project
<a href="/en/project/EE2.3.20.0256" target="_blank" >EE2.3.20.0256: Local team and international consortium for computational modelling of a cyanobacterial cell</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach
Others
Publication year
2014
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
Proceedings of the 5th International Workshop on Interactions between Computer Science and Biology (CS2Bio?14)
ISBN
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ISSN
1571-0661
e-ISSN
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Number of pages
14
Pages from-to
31-44
Publisher name
Elsevier
Place of publication
Amsterdam
Event location
Berlin
Event date
Jan 1, 2014
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
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