A flexible denormalization technique for data analysis above a deeply-structured relational database: biomedical applications

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F15%3A00082481" target="_blank" >RIV/00216224:14330/15:00082481 - isvavai.cz</a>
Result on the web
<a href="http://link.springer.com/chapter/10.1007%2F978-3-319-16483-0_12" target="_blank" >http://link.springer.com/chapter/10.1007%2F978-3-319-16483-0_12</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/978-3-319-16483-0_12" target="_blank" >10.1007/978-3-319-16483-0_12</a>

Result language
angličtina
Original language name
A flexible denormalization technique for data analysis above a deeply-structured relational database: biomedical applications
Original language description
Relational databases are sometimes used to store biomedical and patient data in large clinical or international projects. This data is inherently deeply structured, records for individual patients contain varying number of variables. When ad-hoc access to data subsets is needed, standard database access tools do not allow for rapid command prototyping and variable selection to create flat data tables. In the context of Thalamoss, an international research project on beta-thalassemia, we developed and experimented with an interactive variable selection method addressing these needs. Our newly-developed Python library sqlAutoDenorm.py automatically generates SQL commands to denormalize a subset of database tables and their relevant records, effectively generating a flat table from arbitrarily structured data. The denormalization process can be controlled by a small number of user-tunable parameters.
Czech name
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Czech description
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Project
<a href="/en/project/7E13011" target="_blank" >7E13011: THALAssaemia MOdular Stratification System for personalized therapy of beta-thalassemia</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2015
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Article name in the collection
Lecture Notes in Computer Science 9043, Bioinformatics and Biomedical Engineering, Third International Conference, IWBBIO 2015, Granada, Spain, April 15-17 2015, Proceedings, Part I
ISBN
9783319164823
ISSN
0302-9743
e-ISSN
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Number of pages
14
Pages from-to
120-133
Publisher name
Springer International Publishing
Place of publication
Cham
Event location
Granada, Spain
Event date
Apr 15, 2015
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
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