BCSgen: Biochemical Space language software tool

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F17%3A00101020" target="_blank" >RIV/00216224:14330/17:00101020 - isvavai.cz</a>

Result on the web

<a href="https://sybila.fi.muni.cz/tools_html/bsgen.html" target="_blank" >https://sybila.fi.muni.cz/tools_html/bsgen.html</a>

DOI - Digital Object Identifier

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Result language

angličtina

Original language name

BCSgen: Biochemical Space language software tool

Original language description

BCSgen is a software providing basic functionality to write, maintain, and analyse models written in Biochemical Space Language (BCSL). The key features of the tool are: interactive editor which allows users to create and load models providing automatic syntax highlighting and errors reporting; transition system analysis allows to generate transition system for a given model and consequently analyse it (e.g. perform reachability analysis); simulation of a model with defined kinetic rates with either deterministic or stochastic approach; visualisation of simulated data in an interactive plot chart and visualisation of transition system in a web-based visualisation for exploration of whole space.

Czech name

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Czech description

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Type

R - Software

CEP classification

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OECD FORD branch

10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2017

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Internal product ID

BCSgen

Technical parameters

Python, desktopová aplikace

Economical parameters

nekomerční software, použití volné

Owner IČO

00216224

Owner name

Fakulta informatiky, Masarykova univerzita