DockVis: Visual Analysis of Molecular Docking Data
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F19%3A00107523" target="_blank" >RIV/00216224:14330/19:00107523 - isvavai.cz</a>
Alternative codes found
RIV/68407700:21230/19:00335515
Result on the web
<a href="http://dx.doi.org/10.2312/vcbm.20191238" target="_blank" >http://dx.doi.org/10.2312/vcbm.20191238</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.2312/vcbm.20191238" target="_blank" >10.2312/vcbm.20191238</a>
Alternative languages
Result language
angličtina
Original language name
DockVis: Visual Analysis of Molecular Docking Data
Original language description
Molecular docking is one of the key mechanisms for predicting possible interactions between ligands and proteins. This highly complex task can be simulated by several software tools, providing the biochemists with possible ligand trajectories, which have to be subsequently explored and evaluated for their biochemical relevance. This paper focuses on aiding this exploration process by introducing DockVis visual analysis tool. DockVis operates primarily with the multivariate output data from one of the latest available tools for molecular docking, CaverDock. CaverDock output consists of several parameters and properties, which have to be subsequently studied and understood. DockVis was designed in tight collaboration with protein engineers using the CaverDock tool. However, we believe that the concept of DockVis can be extended to any other molecular docking tool providing the users with corresponding computation results.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
<a href="/en/project/GA17-07690S" target="_blank" >GA17-07690S: Methods of Identification and Visualization of Tunnels for Flexible Ligands in Dynamic Proteins</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach
Others
Publication year
2019
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
Eurographics Workshop on Visual Computing for Biology and Medicine
ISBN
9783038680819
ISSN
2070-5786
e-ISSN
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Number of pages
10
Pages from-to
113-122
Publisher name
The Eurographics Association
Place of publication
Brno
Event location
Brno
Event date
Sep 4, 2019
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
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