Recording provenance of workflow runs with RO-Crate

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14610%2F24%3A00138446" target="_blank" >RIV/00216224:14610/24:00138446 - isvavai.cz</a>

Result on the web

<a href="https://doi.org/10.1371/journal.pone.0309210" target="_blank" >https://doi.org/10.1371/journal.pone.0309210</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1371/journal.pone.0309210" target="_blank" >10.1371/journal.pone.0309210</a>

Result language

angličtina

Original language name

Recording provenance of workflow runs with RO-Crate

Original language description

Recording the provenance of scientific computation results is key to the support of traceability, reproducibility and quality assessment of data products. Several data models have been explored to address this need, providing representations of workflow plans and their executions as well as means of packaging the resulting information for archiving and sharing. However, existing approaches tend to lack interoperable adoption across workflow management systems. In this work we present Workflow Run RO-Crate, an extension of RO-Crate (Research Object Crate) and Schema.org to capture the provenance of the execution of computational workflows at different levels of granularity and bundle together all their associated objects (inputs, outputs, code, etc.). The model is supported by a diverse, open community that runs regular meetings, discussing development, maintenance and adoption aspects. Workflow Run RO-Crate is already implemented by several workflow management systems, allowing interoperable comparisons between workflow runs from heterogeneous systems. We describe the model, its alignment to standards such as W3C PROV, and its implementation in six workflow systems. Finally, we illustrate the application of Workflow Run RO-Crate in two use cases of machine learning in the digital image analysis domain.

Czech name

—

Czech description

—

Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

—

OECD FORD branch

10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Project

—

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2024

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

PLOS ONE

ISSN

1932-6203

e-ISSN

1932-6203

Volume of the periodical

19

Issue of the periodical within the volume

9

Country of publishing house

US - UNITED STATES

Number of pages

35

Pages from-to

1-35

UT code for WoS article

001310013000003

EID of the result in the Scopus database

2-s2.0-85203530117