Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14740%2F15%3A00084835" target="_blank" >RIV/00216224:14740/15:00084835 - isvavai.cz</a>
Result on the web
<a href="http://journal.frontiersin.org/article/10.3389/fmicb.2015.00526/abstract" target="_blank" >http://journal.frontiersin.org/article/10.3389/fmicb.2015.00526/abstract</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.3389/fmicb.2015.00526" target="_blank" >10.3389/fmicb.2015.00526</a>
Alternative languages
Result language
angličtina
Original language name
Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species
Original language description
In the carnivorous plant genus Genlisea a unique lobster pot trapping mechanism supplements nutrition in nutrient-poor habitats. A wide spectrum of microbes frequently occurs in Genlisea's leaf-derived traps without clear relevance for Genlisea carnivory. We sequenced the metatranscriptomes of subterrestrial traps vs. the aerial chlorophyll-containing leaves of G. nigrocaulis and of G. hispidula. Ribosomal RNA assignment revealed soil-borne microbial diversity in Genlisea traps, with 92 genera of 19 phyla present in more than one sample. Microbes from 16 of these phyla including proteobacteria, green algae, amoebozoa, fungi, ciliates and metazoans, contributed additionally short-lived mRNA to the metatranscriptome. Furthermore, transcripts of 438 members of hydrolases (e.g., proteases, phosphatases, lipases), mainly resembling those of metazoans, ciliates and green algae, were found.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EE - Microbiology, virology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/EE2.3.20.0189" target="_blank" >EE2.3.20.0189: Development of excellence in evolutionary cytogenomics, epigenetics and cell signalling</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2015
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Frontiers in Microbiology
ISSN
1664-302X
e-ISSN
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Volume of the periodical
6
Issue of the periodical within the volume
july
Country of publishing house
CH - SWITZERLAND
Number of pages
15
Pages from-to
"nestránkováno"
UT code for WoS article
000358573200001
EID of the result in the Scopus database
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