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Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216305%3A26220%2F19%3APR32149" target="_blank" >RIV/00216305:26220/19:PR32149 - isvavai.cz</a>

  • Result on the web

    <a href="https://github.com/mrkolarik/3D-brain-segmentation" target="_blank" >https://github.com/mrkolarik/3D-brain-segmentation</a>

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation

  • Original language description

    A complete open-source code to Paper "Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation" published at MDPI Applied sciences journal - https://www.mdpi.com/2076-3417/9/3/404. Most useful parts of this software are python keras scripts with source code for 2D and 3D Dense-U-Net network models. Its an upgraded U-Net that we obtained better results than with classic U-Net and current hardware is capable of fitting it into GPU memory. 3D and 2D versions of Dense-U-Net, Res-U-Net and classic U-Net implementations are included.

  • Czech name

  • Czech description

Classification

  • Type

    R - Software

  • CEP classification

  • OECD FORD branch

    10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Result continuities

  • Project

  • Continuities

    S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2019

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Internal product ID

    Dense-U-Net

  • Technical parameters

    Navržený software je využívaný zaměstnanci VUT FEKT k automatickému segmentování modelů mozku a páteře pomocí hlubokých neuronových sítí.

  • Economical parameters

    Poskytnuto zdarma široké verejnosti pod open-source licencí (MIT).

  • Owner IČO

  • Owner name

    Ústav telekomunikací