Force field parametrization of hydrogenoxalate and oxalate anions with scaled charges
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216305%3A26310%2F17%3APU136188" target="_blank" >RIV/00216305:26310/17:PU136188 - isvavai.cz</a>
Alternative codes found
RIV/60076658:12310/17:43895658
Result on the web
<a href="http://apps.webofknowledge.com.ezproxy.lib.vutbr.cz/full_record.do?product=WOS&search_mode=GeneralSearch&qid=15&SID=E6JXvEJHJpsw8EibggE&page=1&doc=1" target="_blank" >http://apps.webofknowledge.com.ezproxy.lib.vutbr.cz/full_record.do?product=WOS&search_mode=GeneralSearch&qid=15&SID=E6JXvEJHJpsw8EibggE&page=1&doc=1</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/s00894-017-3490-x" target="_blank" >10.1007/s00894-017-3490-x</a>
Alternative languages
Result language
angličtina
Original language name
Force field parametrization of hydrogenoxalate and oxalate anions with scaled charges
Original language description
Models of the hydrogenoxalate (bioxalate, charge -1) and oxalate (charge -2) anions were developed for classical molecular dynamics (CMD) simulations and parametrized against ab initio molecular dynamics (AIMD) data from our previous study (Kroutil et al. (2016) J Mol Model 22: 210). The interactions of the anions with water were described using charges scaled according to the electronic continuum correction approach with rescaling of nonbonded parameters (ECCR), and those descriptions of anion interactions were found to agree well with relevant AIMD and experimental results. The models with full RESP charges showed excessively strong electrostatic interactions between the solute and water molecules, leading to an overstructured solvation shell around the anions and thus to a diffusion coefficient that was much too low. The effect of charge scaling was more evident for the oxalate dianion than for the hydrogenoxalate anion. Our work provides CMD models for ions of oxalic acid and extends previous studies that showed the importance of ECCR for modeling divalent ions and ions of organic compounds.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10608 - Biochemistry and molecular biology
Result continuities
Project
<a href="/en/project/LO1211" target="_blank" >LO1211: Materials Research Centre at FCH BUT- Sustainability and Development</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2017
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
JOURNAL OF MOLECULAR MODELING
ISSN
1610-2940
e-ISSN
0948-5023
Volume of the periodical
23
Issue of the periodical within the volume
11
Country of publishing house
DE - GERMANY
Number of pages
8
Pages from-to
1-8
UT code for WoS article
000414003100001
EID of the result in the Scopus database
2-s2.0-85032575873