Complete genome sequence of cherry virus T, a novel cherry-infecting tepovirus

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F25271121%3A_____%2F20%3AN0000120" target="_blank" >RIV/25271121:_____/20:N0000120 - isvavai.cz</a>

Alternative codes found

RIV/61989592:15310/20:73606527

Result on the web

<a href="https://link.springer.com/article/10.1007%2Fs00705-020-04656-w" target="_blank" >https://link.springer.com/article/10.1007%2Fs00705-020-04656-w</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s00705-020-04656-w" target="_blank" >10.1007/s00705-020-04656-w</a>

Result language

angličtina

Original language name

Complete genome sequence of cherry virus T, a novel cherry-infecting tepovirus

Original language description

Double-stranded RNA and total RNA purified from sour cherry leaves (Prunus cerasus, cv. Amarelka Chvalkovicka) was analyzed by high-throughput sequencing. BLAST annotation identified contigs with homology to several already known cherry-infecting viruses (prune dwarf virus, prunus necrotic ringspot virus, prunus virus F, little cherry virus 1) as well as contigs with sequences more distantly related to those of members of the family Betaflexiviridae and in particular to prunus virus T of the genus Tepovirus. The full genome sequence of a putative virus (6,847 nucleotides [nt]; GenBank no. MT090966) was assembled and completed at the genome ends. The genome has a typical tepovirus organization, contain-ing three overlapping open reading frames (ORFs), encoding a replication-associated protein, a movement protein and a capsid protein, respectively. Both its genome organization and its phylogenetic relationships show that the virus belongs to the genus Tepovirus, but considering the species demarcation criteria for the family Betaflexiviridae, it appears to represent a novel virus species, and we propose the name “cherry virus T” (ChVT) for this virus.

Czech name

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Czech description

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Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

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OECD FORD branch

10607 - Virology

Project

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Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2020

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Archives of Virology

ISSN

0304-8608

e-ISSN

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Volume of the periodical

165

Issue of the periodical within the volume

7

Country of publishing house

AT - AUSTRIA

Number of pages

4

Pages from-to

1711-1714

UT code for WoS article

000532887000003

EID of the result in the Scopus database

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