Parallel algorithms for degenerate and weighted sequences derived from high throughput sequencing technologies
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F49777513%3A23520%2F09%3A00504029" target="_blank" >RIV/49777513:23520/09:00504029 - isvavai.cz</a>
Result on the web
—
DOI - Digital Object Identifier
—
Alternative languages
Result language
angličtina
Original language name
Parallel algorithms for degenerate and weighted sequences derived from high throughput sequencing technologies
Original language description
In this paper, we address the problem of efficiently mapping and classifying millions of degenerate and weighted sequences to a reference genome, based on whether they occur exactly once in the genome or not, and by taking into consideration probabilityscores. In particular, we design parallel algorithms for Massive Exact and Approximate Unique Pattern Matching for degenerate and weighted sequences derived from high throughput sequencing technologies.
Czech name
—
Czech description
—
Classification
Type
O - Miscellaneous
CEP classification
BA - General mathematics
OECD FORD branch
—
Result continuities
Project
—
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2009
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů