A Novel Approach to Multi-Compartmental Model Implementation to Achieve Metabolic Model Identifiability on Patient's CGM Data
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F49777513%3A23520%2F22%3A43966174" target="_blank" >RIV/49777513:23520/22:43966174 - isvavai.cz</a>
Result on the web
<a href="https://www.sciencedirect.com/science/article/pii/S1877050922015848" target="_blank" >https://www.sciencedirect.com/science/article/pii/S1877050922015848</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/j.procs.2022.10.127" target="_blank" >10.1016/j.procs.2022.10.127</a>
Alternative languages
Result language
angličtina
Original language name
A Novel Approach to Multi-Compartmental Model Implementation to Achieve Metabolic Model Identifiability on Patient's CGM Data
Original language description
Diabetes is a widespread civilization disease. When developing a new treatment method, in-silico benefits the development process by reducing the need for in-vivo subjects. In-silico evaluation requires a reliable metabolic model, often created as a multi-compartmental model. A common approach to implementing a multi-compartmental model is to use a system of ordinary differential equations. This approach utilises exponential transfer functions to transfer substances among the compartments. Using other than an exponential function is complex. Therefore, we propose a novel approach based on a direct, numeric integration of separated compartments, which can be further divided into individual depots. This enables to model substance transfer as a separate process with non-exponential characteristics, e.g.; when modelling carbohydrate absorption from the gut. As another benefit, the approach obeys the law of mass conservation on both the computational and architectural levels. This is a key feature when identifying a model on data, that are not measured within a controlled, isolated environment. Moreover, we actually transform the set of equations, i.e.; computer-code functions, into a component model to reduce the total maintenance costs – readability, testing, verification and deployment. We demonstrate the proposed approach by converting the Samadi model to it and enhancing it with a non-exponential transfer function.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
<a href="/en/project/EF19_073%2F0016931" target="_blank" >EF19_073/0016931: Improving the quality of the internal grant structure at UWB</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2022
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
Procedia Computer Science
ISBN
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ISSN
1877-0509
e-ISSN
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Number of pages
8
Pages from-to
116-123
Publisher name
Elsevier
Place of publication
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Event location
Leuven, Belgium
Event date
Oct 26, 2022
Type of event by nationality
EUR - Evropská akce
UT code for WoS article
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