Applications of next-generation sequencing in fisheries research: A review

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60076658%3A12520%2F17%3A43891192" target="_blank" >RIV/60076658:12520/17:43891192 - isvavai.cz</a>

Result on the web

<a href="http://www.sciencedirect.com/science/article/pii/S0165783616302338" target="_blank" >http://www.sciencedirect.com/science/article/pii/S0165783616302338</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.fishres.2016.07.021" target="_blank" >10.1016/j.fishres.2016.07.021</a>

Result language

angličtina

Original language name

Applications of next-generation sequencing in fisheries research: A review

Original language description

The rapid advancement and decreasing costs of next-generation sequencing (NGS) technologies have revolutionized the field of genomics and beyond. NGS has led to astonishing number of scientific advances and has offered a paradigm shift from gene to genome-wide research in the field of fisheries and aqua culture. Researchers in fish biology have used NGS to discover novel genetic markers for population and traceability studies. Additionally, NGS technologies have been utilized for ecotoxicological applications, genome-wide characterization to find the genomic regions associated with commercially important traits, profiling of messenger-RNAs and micro-RNAs to study the control of biological processes, and to learn more about evolutionary questions. In recent years, great efforts have been made on sequencing the genomes of economically important aquaculture species. These efforts have shown astounding potential to bring enormous change in genetic and biological research in fisheries and aquaculture. Nevertheless, genomic information for most of the fish species is still lacking and results of some studies using NGS were presented without keeping proper sampling and/or experimental design. Future studies should be spread on other non-model species, but with proper sampling respecting aim of such studies. Only then, it is possible to understand well genetic and biological significance of investigated species for fisheries and aquaculture. This review summarizes various applications of next-generation sequencing that has been used in fishery research up to now.

Czech name

—

Czech description

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Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

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OECD FORD branch

40103 - Fishery

Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2017

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Fisheries Research

ISSN

0165-7836

e-ISSN

—

Volume of the periodical

186

Issue of the periodical within the volume

1

Country of publishing house

NL - THE KINGDOM OF THE NETHERLANDS

Number of pages

12

Pages from-to

11-22

UT code for WoS article

000390494900002

EID of the result in the Scopus database

2-s2.0-84980347669