Analysis of simple sequence repeat (SSR) polymorphism between N22 and Uma rice varieties for marker assisted selection

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60076658%3A12520%2F18%3A43897286" target="_blank" >RIV/60076658:12520/18:43897286 - isvavai.cz</a>

Result on the web

<a href="http://ejplantbreeding.com/index.php?journal=EJPB&page=article&op=view&path%5B%5D=2453" target="_blank" >http://ejplantbreeding.com/index.php?journal=EJPB&page=article&op=view&path%5B%5D=2453</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.5958/0975-928X.2018.00062.5" target="_blank" >10.5958/0975-928X.2018.00062.5</a>

Result language

angličtina

Original language name

Analysis of simple sequence repeat (SSR) polymorphism between N22 and Uma rice varieties for marker assisted selection

Original language description

SSR polymorphism in two rice varieties viz., N22 (donor parent for heat and drought tolerance) and Uma (high yielding variety susceptible to heat and drought) was investigated to identify ready to use SSR markers which can be employed in selection in the marker assisted breeding programmes involving these varieties. For this, 197 simple sequence repeat (SSR) primers which were distributed on all the twelve chromosomes of rice were utilised. The results revealed distinct polymorphism among the tolerant and susceptible parents for 41 RM primers. Based on this study, the large range of similarity and dissimilarity values for N22 and Uma provides greater confidence for the assessment of simple sequence repeat (SSR) polymorphism. Diversity analysis can be done by using these polymorphic SSR markers. These polymorphic markers can also be used for the linkage analysis of various traits. Besides, these identified polymorphic SSR markers can be utilised for QTL mapping by screening the progenies of the cross Uma × N22.

Czech name

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Czech description

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Type

J_SC - Article in a specialist periodical, which is included in the SCOPUS database

CEP classification

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OECD FORD branch

40403 - Agricultural biotechnology related ethics

Project

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Continuities

N - Vyzkumna aktivita podporovana z neverejnych zdroju

Publication year

2018

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Electronic Journal of Plant Breeding

ISSN

0975-928X

e-ISSN

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Volume of the periodical

9

Issue of the periodical within the volume

2

Country of publishing house

IN - INDIA

Number of pages

7

Pages from-to

511-517

UT code for WoS article

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EID of the result in the Scopus database

2-s2.0-85049995428