Next generation sequencing reveals genome downsizing in allotetraploid Nicotiana tabacum, predominantly through the elimination of paternally derived repetitive DNAs
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F11%3A00370331" target="_blank" >RIV/60077344:_____/11:00370331 - isvavai.cz</a>
Alternative codes found
RIV/68081707:_____/11:00370331
Result on the web
<a href="http://dx.doi.org/10.1093/molbev/msr112" target="_blank" >http://dx.doi.org/10.1093/molbev/msr112</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/molbev/msr112" target="_blank" >10.1093/molbev/msr112</a>
Alternative languages
Result language
angličtina
Original language name
Next generation sequencing reveals genome downsizing in allotetraploid Nicotiana tabacum, predominantly through the elimination of paternally derived repetitive DNAs
Original language description
In this work we applied next generation 454 sequencing to analyse genomes of Nicotiana tabacum (tobacco) allotetraploid and its progenitors N. sylvestris and N. tomentosiformis. Using bioinformatic similarity searches we show that the maternal N. sylvestris genome is relatively stable in the tobacco while the paternally derived N. tomentosiformis genome suffered from megased elimination of repeated DNA.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
BO - Biophysics
OECD FORD branch
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Result continuities
Project
<a href="/en/project/OC10037" target="_blank" >OC10037: Investigation of plant repetitive DNA by bioinformatic analysis of next-generation sequencing data</a><br>
Continuities
Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2011
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Molecular Biology and Evolution
ISSN
0737-4038
e-ISSN
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Volume of the periodical
28
Issue of the periodical within the volume
10
Country of publishing house
GB - UNITED KINGDOM
Number of pages
12
Pages from-to
2843-2854
UT code for WoS article
000295184200013
EID of the result in the Scopus database
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