Cattle impact on composition of archaeal, bacterial, and fungal communities by comparative fingerprinting of total and extracellular DNA

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F13%3A00394878" target="_blank" >RIV/60077344:_____/13:00394878 - isvavai.cz</a>

Alternative codes found

RIV/60076658:12310/13:43885354

Result on the web

<a href="http://dx.doi.org/10.1007/s00374-012-0726-x" target="_blank" >http://dx.doi.org/10.1007/s00374-012-0726-x</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s00374-012-0726-x" target="_blank" >10.1007/s00374-012-0726-x</a>

Result language

angličtina

Original language name

Cattle impact on composition of archaeal, bacterial, and fungal communities by comparative fingerprinting of total and extracellular DNA

Original language description

The aim of the study was to evaluate the impact of cattle overwintering husbandry on composition of upland grassland soil archaeal, bacterial, and fungal communities by comparative fingerprinting (SSU rRNA denaturing gradient gel electrophoresis (DGGE))of total (tDNA) and extracellular DNA (eDNA) extracted from three differently impacted soils (severely, moderately, and non-impacted soil) and cattle excrements. Cattle excrements carried a significant amount of viable microorganisms and eDNA, and as a result of its high external returns, the amounts of extractable eDNA in soil increased with cattle impact, being positively correlated with soil microbial biomass and activity. The soil eDNA fraction (2.8 to 5.7 ?g g-1 dw) significantly contributed to thesoil metagenome, representing 18-31 % of soil tDNA. The largest shift in soil community structure was observed for Archaea, followed by fungi and bacteria, indicating that soil bacteria possess the highest resilience to cattle-induced ch

Czech name

—

Czech description

—

Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EE - Microbiology, virology

OECD FORD branch

—

Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2013

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Biology and Fertility of Soils

ISSN

0178-2762

e-ISSN

—

Volume of the periodical

49

Issue of the periodical within the volume

3

Country of publishing house

NL - THE KINGDOM OF THE NETHERLANDS

Number of pages

11

Pages from-to

351-361

UT code for WoS article

000316341400011

EID of the result in the Scopus database

—