Molecular Characterization of Extrachromosomal DNA Accompanying Primula Red Phytoplasma

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F15%3A00443121" target="_blank" >RIV/60077344:_____/15:00443121 - isvavai.cz</a>

Result on the web

<a href="http://dx.doi.org/10.1111/jph.12265" target="_blank" >http://dx.doi.org/10.1111/jph.12265</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1111/jph.12265" target="_blank" >10.1111/jph.12265</a>

Result language

angličtina

Original language name

Molecular Characterization of Extrachromosomal DNA Accompanying Primula Red Phytoplasma

Original language description

The complete nucleotide sequence of an extrachromosomal element found in primula red isolate of Candidatus Phytoplasma asteris' (16SrI-B subgroup) was determined. The plasmid, named pPrR, is 4378bp in length and has 75% A+T content that is similar to that of the phytoplasma genome. It encodes six putative open reading frames (ORF) longer than 100 amino acids and two smaller ones. The structural organization of the rep gene is similar to that found in plasmids which replicate via rolling circle mechanism. Furthermore, it has homology to both the plasmid pLS1 family and helicase domains of replication-associated proteins (Rap) of eukaryotic viruses and geminiviruses. The ORF arrangement and genes sequences are most similar to the pPARG1 plasmid from Rehmannia glutinosa' phytoplasma.

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EE - Microbiology, virology

OECD FORD branch

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Project

<a href="/en/project/LD12074" target="_blank" >LD12074: Analysis of phytoplasma genomic components and development of a microarray for their determination and management.</a><br>

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2015

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Journal of Phytopathology - Phytopathologische Zeitschrift

ISSN

0931-1785

e-ISSN

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Volume of the periodical

163

Issue of the periodical within the volume

3

Country of publishing house

DE - GERMANY

Number of pages

5

Pages from-to

222-226

UT code for WoS article

000349780900009

EID of the result in the Scopus database

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