Transcriptomic analyses provide insights into plant-viroid interactions
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F23%3A00584523" target="_blank" >RIV/60077344:_____/23:00584523 - isvavai.cz</a>
Result on the web
<a href="https://shop.elsevier.com/books/fundamentals-of-viroid-biology/adkar-purushothama/978-0-323-99688-4" target="_blank" >https://shop.elsevier.com/books/fundamentals-of-viroid-biology/adkar-purushothama/978-0-323-99688-4</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/B978-0-323-99688-4.00010-9" target="_blank" >10.1016/B978-0-323-99688-4.00010-9</a>
Alternative languages
Result language
angličtina
Original language name
Transcriptomic analyses provide insights into plant-viroid interactions
Original language description
Plants have evolved elegant regulatory programs that can rapidly elicit the expression of defense-related genes in response to pests and pathogens, such as viroids. These defense-related genes include small RNAs, long noncoding RNAs, protein-coding mRNAs, etc. Transcriptomic analyses provide a powerful toolset to uncover those genes that have altered expression profiles in viroid-infected plants. This chapter introduces the basic concept and a brief history of transcriptomic analysis as well as its application in understanding plant-viroid interactions. This chapter intends to focus on introducing the background and methodology of transcriptomic analyses instead of providing a comprehensive literature review. While the chapter focuses on the description of the most popular RNA deep sequencing analyses, readers are referred to other resources in the Further Reading section to gain a better grasp on small RNA deep sequencing, degradome RNA deep sequencing, etc.
Czech name
—
Czech description
—
Classification
Type
C - Chapter in a specialist book
CEP classification
—
OECD FORD branch
10607 - Virology
Result continuities
Project
<a href="/en/project/GC18-10515J" target="_blank" >GC18-10515J: Mechanisms of parasitic RNA propagation and elimination in male germline studied on economically important viroid species.</a><br>
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2023
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Book/collection name
Fundamentals of Viroid Biology
ISBN
978-032399688-4
Number of pages of the result
20
Pages from-to
255-274
Number of pages of the book
444
Publisher name
Elsevier
Place of publication
London
UT code for WoS chapter
—