High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41320%2F15%3A66011" target="_blank" >RIV/60460709:41320/15:66011 - isvavai.cz</a>

Result on the web

<a href="http://dx.doi.org/10.1186/s12864-015-1215-z" target="_blank" >http://dx.doi.org/10.1186/s12864-015-1215-z</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1186/s12864-015-1215-z" target="_blank" >10.1186/s12864-015-1215-z</a>

Result language

angličtina

Original language name

High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus

Original language description

QTL cloning for the discovery of genes underlying polygenic traits has historically been cumbersome in long-lived perennial plants like Populus. Linkage disequilibrium-based association mapping has been proposed as a cloning tool, and recent advances inhighthroughput genotyping and whole-genome resequencing enable marker saturation to levels sufficient for association mapping with no a priori candidate gene selection. Here, evaluation of cell wall phenotypes was conducted in an interspecific P. trichocarpa x P. deltoides pseudo-backcross mapping pedigree and two populations of P. trichocarpa. QTL mapping was conducted using a high-density genetic map with 3,568 SNP markers. As a fine-mapping approach, chromosome-wide association mapping targeting a QTL hot-spot on linkage group XIV was performed in the two P. trichocarpa populations. Both populations were genotyped using the 34 K Populus Infinium SNP array and whole-genome resequencing of one of the populations facilitated marker-satu

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

GK - Forestry

OECD FORD branch

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Project

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Continuities

S - Specificky vyzkum na vysokych skolach

Publication year

2015

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

BMC GENOMICS

ISSN

1471-2164

e-ISSN

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Volume of the periodical

16

Issue of the periodical within the volume

24

Country of publishing house

CZ - CZECH REPUBLIC

Number of pages

14

Pages from-to

1-14

UT code for WoS article

000348936800001

EID of the result in the Scopus database

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