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Towards a molecular dynamics consensus view of B-DNA flexibility

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388963%3A_____%2F08%3A00310115" target="_blank" >RIV/61388963:_____/08:00310115 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Towards a molecular dynamics consensus view of B-DNA flexibility

  • Original language description

    We present a systematic study of B-DNA flexibility in aqueous solution using long-scale molecular dynamics simulations with the two more recent versions of nucleic acids force fields (CHARMM27 and parmbsc0) using four long duplexes designed to contain several copies of each individual base pair step.

  • Czech name

    Simulace flexibility B-DNA molekulovou dynamikou

  • Czech description

    Práce je systematickou studií flexibility B-DNA ve vodném roztoku užitím rozsáhlých simulací molekulové dynamiky. Byla použita dvě moderní silová pole (CHARMM27 a parmbsc0) a studie byla provedena na čtyřech dlouhých duplexech DNA obsahujících kopie všech dinukleotidů.

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    CF - Physical chemistry and theoretical chemistry

  • OECD FORD branch

Result continuities

  • Project

  • Continuities

    Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2008

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Nucleic Acids Research

  • ISSN

    0305-1048

  • e-ISSN

  • Volume of the periodical

    36

  • Issue of the periodical within the volume

    7

  • Country of publishing house

    GB - UNITED KINGDOM

  • Number of pages

    16

  • Pages from-to

  • UT code for WoS article

    000255152200032

  • EID of the result in the Scopus database