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Pyramidalization of the Glycosidic Nitrogen Provides the Way for Efficient Cleavage of the N-Glycosidic Bond of 8-OxoG with the hOGG1 DNA Repair Protein

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388963%3A_____%2F12%3A00382846" target="_blank" >RIV/61388963:_____/12:00382846 - isvavai.cz</a>

  • Result on the web

    <a href="http://dx.doi.org/10.1021/jp309098d" target="_blank" >http://dx.doi.org/10.1021/jp309098d</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1021/jp309098d" target="_blank" >10.1021/jp309098d</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Pyramidalization of the Glycosidic Nitrogen Provides the Way for Efficient Cleavage of the N-Glycosidic Bond of 8-OxoG with the hOGG1 DNA Repair Protein

  • Original language description

    A mechanistic pathway for cleavage of the N-glycosidic bond of 8-oxo-2-deoxyguanosine (oxoG) catalyzed with the human 8-oxoguanine glycosylase 1 DNA repair protein (hOGG1) is proposed in this theoretical study. The reaction scheme suggests direct protonaddition to the glycosidic nitrogen N9 of oxoG from the N?-ammonium of Lys249 residue of hOGG1 that is enabled owing to the N9 pyramidal geometry. The modification of aromatic character introduced by oxidation to the nucleobase thus seems to be the factor that is checked by hOGG1 to achieve base-specific cleavage.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    CF - Physical chemistry and theoretical chemistry

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/GAP205%2F10%2F0228" target="_blank" >GAP205/10/0228: Structure and Dynaics of Bioinorganic Complexes</a><br>

  • Continuities

    Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2012

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Journal of Physical Chemistry B

  • ISSN

    1520-6106

  • e-ISSN

  • Volume of the periodical

    116

  • Issue of the periodical within the volume

    41

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    10

  • Pages from-to

    12535-12544

  • UT code for WoS article

    000309902400016

  • EID of the result in the Scopus database