cpPredictor: a web server for template-based prediction of RNA secondary structure
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F19%3A00500029" target="_blank" >RIV/61388971:_____/19:00500029 - isvavai.cz</a>
Result on the web
<a href="https://academic.oup.com/bioinformatics/article-abstract/35/7/1231/5086391?redirectedFrom=fulltext" target="_blank" >https://academic.oup.com/bioinformatics/article-abstract/35/7/1231/5086391?redirectedFrom=fulltext</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/bioinformatics/bty753" target="_blank" >10.1093/bioinformatics/bty753</a>
Alternative languages
Result language
angličtina
Original language name
cpPredictor: a web server for template-based prediction of RNA secondary structure
Original language description
We present the cpPredictor webserver that implements a novel template-based method for prediction of secondary structure of RNA. The method outperforms available prediction methods as it uses RNA structures of related molecules, either predicted or experimentally identified, as structural templates. The server aims at three major tasks: i) prediction of RNA secondary structuresnthat are difficult to predict by available methods, ii) characterization of uncharacterized RNAs as compatible or incompatible with a chosen template structure and iii) an identification of the most relevant structure among different candidate structures of a single RNA ambiguously predicted by available methods. The web server is accompanied with a comprehensive documentation.nn
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2019
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Bioinformatics
ISSN
1367-4803
e-ISSN
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Volume of the periodical
35
Issue of the periodical within the volume
7
Country of publishing house
GB - UNITED KINGDOM
Number of pages
3
Pages from-to
1231-1233
UT code for WoS article
000465085400020
EID of the result in the Scopus database
2-s2.0-85064130483