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GlobalFungi, a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F20%3A00532878" target="_blank" >RIV/61388971:_____/20:00532878 - isvavai.cz</a>

  • Result on the web

    <a href="https://www.nature.com/articles/s41597-020-0567-7" target="_blank" >https://www.nature.com/articles/s41597-020-0567-7</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1038/s41597-020-0567-7" target="_blank" >10.1038/s41597-020-0567-7</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    GlobalFungi, a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies

  • Original language description

    Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultivated and wild plants and pathogenicity. The high importance of fungi in ecosystem processes contrasts with the incompleteness of our understanding of the patterns of fungal biogeography and the environmental factors that drive those patterns. To reduce this gap of knowledge, we collected and validated data published on the composition of soil fungal communities in terrestrial environments including soil and plant-associated habitats and made them publicly accessible through a user interface at https://globalfungi.com. The GlobalFungi database contains over 600 million observations of fungal sequences across>17 000 samples with geographical locations and additional metadata contained in 178 original studies with millions of unique nucleotide sequences (sequence variants) of the fungal internal transcribed spacers (ITS) 1 and 2 representing fungal species and genera. The study represents the most comprehensive atlas of global fungal distribution, and it is framed in such a way that third-party data addition is possible.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    10606 - Microbiology

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2020

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Scientific Data

  • ISSN

    2052-4463

  • e-ISSN

  • Volume of the periodical

    7

  • Issue of the periodical within the volume

    1

  • Country of publishing house

    GB - UNITED KINGDOM

  • Number of pages

    14

  • Pages from-to

    228

  • UT code for WoS article

    000552858000001

  • EID of the result in the Scopus database

    2-s2.0-85087981103