ReDU: a framework to find and reanalyze public mass spectrometry data

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F20%3A00534785" target="_blank" >RIV/61388971:_____/20:00534785 - isvavai.cz</a>

Result on the web

<a href="https://www.nature.com/articles/s41592-020-0933-6#Sec29" target="_blank" >https://www.nature.com/articles/s41592-020-0933-6#Sec29</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1038/s41592-020-0916-7" target="_blank" >10.1038/s41592-020-0916-7</a>

Result language

angličtina

Original language name

ReDU: a framework to find and reanalyze public mass spectrometry data

Original language description

We present ReDU (https://redu.ucsd.edu/), a system for metadata capture of public mass spectrometry-based metabolomics data, with validated controlled vocabularies. Systematic capture of knowledge enables the reanalysis of public data and/or co-analysis of one's own data. ReDU enables multiple types of analyses, including finding chemicals and associated metadata, comparing the shared and different chemicals between groups of samples, and metadata-filtered, repository-scale molecular networking.

Czech name

—

Czech description

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Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

—

OECD FORD branch

10406 - Analytical chemistry

Project

—

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2020

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Nature Methods

ISSN

1548-7091

e-ISSN

—

Volume of the periodical

17

Issue of the periodical within the volume

9

Country of publishing house

GB - UNITED KINGDOM

Number of pages

4

Pages from-to

901-904

UT code for WoS article

000560290600002

EID of the result in the Scopus database

2-s2.0-85089870197