Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F21%3A00546767" target="_blank" >RIV/61388971:_____/21:00546767 - isvavai.cz</a>
Result on the web
<a href="https://www.nature.com/articles/s41597-021-00987-8" target="_blank" >https://www.nature.com/articles/s41597-021-00987-8</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1038/s41597-021-00987-8" target="_blank" >10.1038/s41597-021-00987-8</a>

Result language
angličtina
Original language name
Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
Original language description
Deadwood represents significant carbon (C) stock in a temperate forests. Its decomposition and C mobilization is accomplished by decomposer microorganisms fungi and bacteria who also supply the foodweb of commensalist microbes. Due to the ecosystem-level importance of deadwood habitat as a C and nutrient stock with significant nitrogen fixation, the deadwood microbiome composition and function are critical to understanding the microbial processes related to its decomposition. We present a comprehensive suite of data packages obtained through environmental DNA and RNA sequencing from natural deadwood. Data provide a complex picture of the composition and function of microbiome on decomposing trunks of European beech (Fagus sylvatica L.) in a natural forest. Packages include deadwood metagenomes, metatranscriptomes, sequences of total RNA, bacterial genomes resolved from metagenomic data and the 16S rRNA gene and ITS2 metabarcoding markers to characterize the bacterial and fungal communities. This project will be of use to microbiologists, environmental biologists and biogeochemists interested in the microbial processes associated with the transformation of recalcitrant plant biomass.
Czech name
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Czech description
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Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
—
OECD FORD branch
10606 - Microbiology

Project
<a href="/en/project/GC21-09334J" target="_blank" >GC21-09334J: Linking microclimate, deadwood microbial diversity, adaption mechanisms and ecosystem processes</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2021
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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