rboAnalyzer webserver: web service for non-coding RNA characterization from NCBI BLAST output
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F21%3A00547237" target="_blank" >RIV/61388971:_____/21:00547237 - isvavai.cz</a>
Result on the web
<a href="https://academic.oup.com/bioinformatics/article-abstract/37/17/2755/6125384?redirectedFrom=fulltext" target="_blank" >https://academic.oup.com/bioinformatics/article-abstract/37/17/2755/6125384?redirectedFrom=fulltext</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/bioinformatics/btab073" target="_blank" >10.1093/bioinformatics/btab073</a>
Alternative languages
Result language
angličtina
Original language name
rboAnalyzer webserver: web service for non-coding RNA characterization from NCBI BLAST output
Original language description
A Summary: We present a web service for improving characterization of non-coding RNAs (ncRNAs) from NCBI BLAST outputs, based on a command-line application rboAnalyzer. Briefly, the application extends subject sequences of selected high scoring pairs (HSPs) in BLAST output to their plausible full length, and predicts their homology and secondary structures. The aim of the application is to aid to characterize subject RNAs in HSPs that come uncharacterized in BLAST output. The main advantages of the web-server are easy use and interactive analysis with search, filtering and data export options.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2021
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Bioinformatics
ISSN
1367-4803
e-ISSN
1460-2059
Volume of the periodical
37
Issue of the periodical within the volume
17
Country of publishing house
GB - UNITED KINGDOM
Number of pages
2
Pages from-to
2755-2756
UT code for WoS article
000697377500034
EID of the result in the Scopus database
2-s2.0-85116466522