Biosynthetic Gene Cluster Analysis in Actinobacterial Genus Streptomyces

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F22%3A00564412" target="_blank" >RIV/61388971:_____/22:00564412 - isvavai.cz</a>
Alternative codes found
RIV/60076658:12310/22:43905993
Result on the web
<a href="https://link.springer.com/protocol/10.1007/978-1-0716-1728-1_33" target="_blank" >https://link.springer.com/protocol/10.1007/978-1-0716-1728-1_33</a>
DOI - Digital Object Identifier
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Result language
angličtina
Original language name
Biosynthetic Gene Cluster Analysis in Actinobacterial Genus Streptomyces
Original language description
Secondary metabolites offer a wide variety of biologically active compounds with great potential in medicine, agriculture, or livestock. With the advance of computational techniques and genome sequencing availability, laborious screening of microbial products can be replaced by more efficient genome mining using extensive genome databases available online. Rapidly developing bioinformatic tools, such as antiSMASH, enable researches to effectively explore the genome of many organisms including plants, fungi, and bacteria and identify biosynthetic gene clusters potentially encoding novel bioactive compounds. In this chapter, we provide a step-by-step guide of using the antiSMASH online tool to identify gene clusters potentially encoding for secondary metabolites in the genome of the model strain Streptomyces griseus NBRC 13350.
Czech name
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Czech description
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Project
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Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year
2022
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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