Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F24%3A00585078" target="_blank" >RIV/61388971:_____/24:00585078 - isvavai.cz</a>
Result on the web
<a href="https://link.springer.com/article/10.1007/s00239-024-10164-1" target="_blank" >https://link.springer.com/article/10.1007/s00239-024-10164-1</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/s00239-024-10164-1" target="_blank" >10.1007/s00239-024-10164-1</a>
Alternative languages
Result language
angličtina
Original language name
Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host
Original language description
The bacterial strain SECRCQ15(T) was isolated from seeds of Chenopodium quinoa in Spain. Phylogenetic, chemotaxonomic, and phenotypic analyses, as well as genome similarity indices, support the classification of the strain into a novel species of the genus Ferdinandcohnia, for which we propose the name Ferdinandcohnia quinoae sp. nov. To dig deep into the speciation features of the strain SECRCQ15(T), we performed a comparative genomic analysis of the genome of this strain and those of the type strains of species from the genus Ferdinandcohnia. We found several genes related with plant growth-promoting mechanisms within the SECRCQ15(T) genome. We also found that singletons of F. quinoae SECRCQ15(T) are mainly related to the use of carbohydrates, which is a common trait of plant-associated bacteria. To further reveal speciation events in this strain, we revealed genes undergoing diversifying selection (e.g., genes encoding ribosomal proteins) and functions likely lost due to pseudogenization. Also, we found that this novel species contains 138 plant-associated gene-cluster functions that are unique within the genus Ferdinandcohnia. These features may explain both the ecological and taxonomical differentiation of this new taxon.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
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Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2024
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Journal of Molecular Evolution
ISSN
0022-2844
e-ISSN
1432-1432
Volume of the periodical
92
Issue of the periodical within the volume
2
Country of publishing house
US - UNITED STATES
Number of pages
12
Pages from-to
169-180
UT code for WoS article
001186725500002
EID of the result in the Scopus database
2-s2.0-85188101101