Svornostia abyssi gen. nov., sp. nov. isolated from the world's deepest silver-uranium mine currently devoted to the extraction of radon-saturated water
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F24%3A00602798" target="_blank" >RIV/61388971:_____/24:00602798 - isvavai.cz</a>
Alternative codes found
RIV/60461373:22330/24:43929527 RIV/60162694:G33__/24:N0000007
Result on the web
<a href="https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006432" target="_blank" >https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006432</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1099/ijsem.0.006432" target="_blank" >10.1099/ijsem.0.006432</a>
Alternative languages
Result language
angličtina
Original language name
Svornostia abyssi gen. nov., sp. nov. isolated from the world's deepest silver-uranium mine currently devoted to the extraction of radon-saturated water
Original language description
A Gram-stain-positive, rod-shaped, aerobic, motile bacterium, J379(T), was isolated from radioactive water spring C1, located in a former silver-uranium mine in the Czech Republic. This slow-growing strain exhibited optimal growth at 24-28 degrees C on solid media with <1 % salt concentration and alkaline pH 8-10. The only respiratory quinone found in strain J379(T) was MK-7(H-4). C-18:1 omega 9c (60.9 %), C-18:0 (9.4 %), C-16:0 and alcohol-C-18:0 (both 6.2 %) were found to be the major fatty acids. The peptidoglycan contained directly cross-linked meso-diaminopimelic acid. Phylogenetic reconstruction based on the 16S rRNA gene sequences and the core-genome analysis revealed that strain J379(T) forms a separate phylogenetic lineage within the recently amended order Solirubrobacterales. A comparison of the 16S rRNA gene sequences between strain J379(T) and other members of the order Solirubrobacterales showed <96 % similarity. This analysis revealed that the closest type strains were Parviterribacter kavangonensis D16/0 /H6(T) (95.2 %), Capillimicrobium parvum 0166_1(T) (94.9 %) and Conexibacter arvalis KV-962(T) (94.5 %). Whole-genome analysis showed that the closest type strain was Baekduia soli BR7-21(T) with an average nucleotide identity of 78 %, average amino acid identity of 63.2 % and percentage of conserved proteins of 48.2 %. The G+C content of the J379T genomic DNA was 71.7 mol%. Based on the phylogenetic and phylogenomic data, as well as its physiological characteristics, strain J379(T) is proposed to represent a type strain (DSM 113746(T)=CCM 9300(T)) of Svornostia abyssi gen. nov. sp. nov. within the family Baekduiaceae.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2024
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
International Journal of Systematic and Evolutionary Microbiology
ISSN
1466-5026
e-ISSN
1466-5034
Volume of the periodical
74
Issue of the periodical within the volume
6
Country of publishing house
GB - UNITED KINGDOM
Number of pages
10
Pages from-to
006432
UT code for WoS article
001267352900003
EID of the result in the Scopus database
2-s2.0-85197018796