Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61389030%3A_____%2F11%3A00365378" target="_blank" >RIV/61389030:_____/11:00365378 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1111/j.1467-7652.2010.00587.x" target="_blank" >http://dx.doi.org/10.1111/j.1467-7652.2010.00587.x</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1111/j.1467-7652.2010.00587.x" target="_blank" >10.1111/j.1467-7652.2010.00587.x</a>
Alternative languages
Result language
angličtina
Original language name
Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS
Original language description
The genome of bread wheat (Triticum aestivum) is predicted to be greater than 16 Gbp in size and consist predominantly of repetitive elements, making the sequencing and assembly of this genome a major challenge. We have reduced genome sequence complexityby isolating chromosome arm 7DS and applied second-generation technology and appropriate algorithmic analysis to sequence and assemble low copy and genic regions of this chromosome arm. The assembly represents approximately 40% of the chromosome arm andall known 7DS genes. Comparison of the 7DS assembly with the sequenced genomes of rice (Oryza sativa) and Brachypodium distachyon identified large regions of conservation. The syntenic relationship between wheat, B. distachyon and O. sativa, along withavailable genetic mapping data, has been used to produce an annotated draft 7DS syntenic build, which is publicly available at http://www.wheatgenome.info.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EB - Genetics and molecular biology
OECD FORD branch
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Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2011
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Plant Biotechnology Journal
ISSN
1467-7644
e-ISSN
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Volume of the periodical
9
Issue of the periodical within the volume
7
Country of publishing house
US - UNITED STATES
Number of pages
8
Pages from-to
768-775
UT code for WoS article
000293659700006
EID of the result in the Scopus database
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