Genotype-specific SNP map based on whole chromosome 3B sequence information from wheat cultivars Arina and Forno

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61389030%3A_____%2F13%3A00393905" target="_blank" >RIV/61389030:_____/13:00393905 - isvavai.cz</a>

Result on the web

<a href="http://dx.doi.org/10.1111/pbi.12003" target="_blank" >http://dx.doi.org/10.1111/pbi.12003</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1111/pbi.12003" target="_blank" >10.1111/pbi.12003</a>

Result language

angličtina

Original language name

Genotype-specific SNP map based on whole chromosome 3B sequence information from wheat cultivars Arina and Forno

Original language description

Agronomically important traits are frequently controlled by rare, genotype-specific alleles. Such genes can only be mapped in a population derived from the donor genotype. This requires the development of a specific genetic map, which is difficult in wheat because of the low level of polymorphism among elite cultivars. The absence of sufficient polymorphism, the complexity of the hexaploid wheat genome as well as the lack of complete sequence information make the construction of genetic maps with a highdensity of reproducible and polymorphic markers challenging. We developed a genotype-specific genetic map of chromosome 3B from winter wheat cultivars Arina and Forno. Chromosome 3B was isolated from the two cultivars and then sequenced to 10-fold coverage. This resulted in a single-nucleotide polymorphisms (SNP) database of the complete chromosome. Based on proposed synteny with the Brachypodium model genome and gene annotation, sequences close to coding regions were used for the devel

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EB - Genetics and molecular biology

OECD FORD branch

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Project

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Continuities

Z - Vyzkumny zamer (s odkazem do CEZ)

Publication year

2013

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Plant Biotechnology Journal

ISSN

1467-7644

e-ISSN

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Volume of the periodical

11

Issue of the periodical within the volume

1

Country of publishing house

US - UNITED STATES

Number of pages

10

Pages from-to

23-32

UT code for WoS article

000312887700003

EID of the result in the Scopus database

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