Plant protein-lipid interfaces studied by molecular dynamics simulations
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61389030%3A_____%2F24%3A00602043" target="_blank" >RIV/61389030:_____/24:00602043 - isvavai.cz</a>
Alternative codes found
RIV/00216208:11310/24:10483319
Result on the web
<a href="https://doi.org/10.1093/jxb/erae228" target="_blank" >https://doi.org/10.1093/jxb/erae228</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/jxb/erae228" target="_blank" >10.1093/jxb/erae228</a>
Alternative languages
Result language
angličtina
Original language name
Plant protein-lipid interfaces studied by molecular dynamics simulations
Original language description
The delineation of protein-lipid interfaces is essential for understanding the mechanisms of various membrane-associated processes crucial to plant development and growth, including signalling, trafficking, and membrane transport. Due to their highly dynamic nature, the precise characterization of lipid-protein interactions by experimental techniques is challenging. Molecular dynamics simulations provide a powerful computational alternative with a spatial-temporal resolution allowing the atomistic-level description. In this review, we aim to introduce plant scientists to molecular dynamics simulations. We describe different steps of performing molecular dynamics simulations and provide a broad survey of molecular dynamics studies investigating plant protein-lipid interfaces. Our aim is also to illustrate that combining molecular dynamics simulations with artificial intelligence-based protein structure determination opens up unprecedented possibilities for future investigations of dynamic plant protein-lipid interfaces.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10601 - Cell biology
Result continuities
Project
<a href="/en/project/GM22-35680M" target="_blank" >GM22-35680M: 4D plate - Spatiotemporal dynamics of cell plate development</a><br>
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2024
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Journal of Experimental Botany
ISSN
0022-0957
e-ISSN
1460-2431
Volume of the periodical
75
Issue of the periodical within the volume
17
Country of publishing house
US - UNITED STATES
Number of pages
14
Pages from-to
5237-5250
UT code for WoS article
001244310800001
EID of the result in the Scopus database
2-s2.0-85204012264