Plastid and nuclear genomic resources of a relict and endangered plant species- Chamaedaphne calyculata (L.) Moench (Ericaceae).

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61988987%3A17310%2F14%3AA1501C0K" target="_blank" >RIV/61988987:17310/14:A1501C0K - isvavai.cz</a>
Result on the web
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DOI - Digital Object Identifier
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Result language
angličtina
Original language name
Plastid and nuclear genomic resources of a relict and endangered plant species- Chamaedaphne calyculata (L.) Moench (Ericaceae).
Original language description
Chamaedaphne calyculata, one of the largest shrubs in the family Ericaceae, is native to boreal zones of the northern hemisphere. The complete nucleotide sequence of the Chamaedaphne plastid genome was determined in the present study. The genome is a circular double-stranded DNA molecule 176,744 bp in length, that includes the typical large single-copy (LSC), small single-copy, and 2 inverted repeats (IR) regions. The C. calyculata plastid genome contains 113 genes, excluding the second IR region. A comparative analysis revealed that the plastid genome organization of the Chamaedaphne plastome is almost identical to that of Vaccinium macrocarpon, the first sequenced chloroplast genome from the family Ericaceae. The most profound changes were observed in regions IRa and IRb, which additionally contain rpl23 and rps14 genes and duplications of trnfM-CAU and trnG-UCC in LSC.
Czech name
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Czech description
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Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EF - Botany
OECD FORD branch
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Project
<a href="/en/project/LO1208" target="_blank" >LO1208: Theoretical aspects of Energetic treatment of Waste and Environment Protection against negative impacts</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2014
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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