MicroRNAs in Vitis vinifera cv. Chardonnay are differentially expressed in response to Diaporthe species

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F62156489%3A43510%2F19%3A43916626" target="_blank" >RIV/62156489:43510/19:43916626 - isvavai.cz</a>

Result on the web

<a href="https://doi.org/10.3390/genes10110905" target="_blank" >https://doi.org/10.3390/genes10110905</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.3390/genes10110905" target="_blank" >10.3390/genes10110905</a>

Result language

angličtina

Original language name

MicroRNAs in Vitis vinifera cv. Chardonnay are differentially expressed in response to Diaporthe species

Original language description

Diaporthe species are important pathogens, saprobes, and endophytes on grapevines. Several species are known, either as agents of pre-or post-harvest infections, as causal agents of many relevant diseases, including swelling arm, trunk cankers, leaf spots, root and fruit rots, wilts, and cane bleaching. A growing body of evidence exists that a class of small non-coding endogenous RNAs, known as microRNAs (miRNAs), play an important role in post-transcriptional gene regulation, during plant development and responses to biotic and abiotic stresses. In this study, we explored differentially expressed miRNAs in response to Diaporthe eres and Diaporthe bohemiae infection in Vitis vinifera cv. Chardonnay under in vitro conditions. We used computational methods to predict putative miRNA targets in order to explore the involvement of possible pathogen response pathways. We identified 136 known and 41 new miRNA sequence variants, likely generated through post-transcriptional modifications. In the Diaporthe eres treatment, 61 known and 17 new miRNAs were identified while in the Diaporthe bohemiae treatment, 101 known and 21 new miRNAs were revealed. Our results contribute to further understanding the role miRNAs play during plant pathogenesis, which is possibly crucial in understanding disease symptom development in grapevines infected by D. eres and D. bohemiae.

Czech name

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Czech description

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Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

—

OECD FORD branch

40106 - Agronomy, plant breeding and plant protection; (Agricultural biotechnology to be 4.4)

Project

<a href="/en/project/TJ02000096" target="_blank" >TJ02000096: Metagenomic survey of vineyard and use of GTD antagonists from Pseudonocardiaceae</a><br>

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2019

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Genes

ISSN

2073-4425

e-ISSN

—

Volume of the periodical

10

Issue of the periodical within the volume

11

Country of publishing house

CH - SWITZERLAND

Number of pages

19

Pages from-to

905

UT code for WoS article

000502296000071

EID of the result in the Scopus database

2-s2.0-85074709704