histoneHMM: Differential analysis of histone modifications with broad genomic footprints

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985823%3A_____%2F15%3A00443201" target="_blank" >RIV/67985823:_____/15:00443201 - isvavai.cz</a>

Result on the web

<a href="http://dx.doi.org/10.1186/s12859-015-0491-6" target="_blank" >http://dx.doi.org/10.1186/s12859-015-0491-6</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1186/s12859-015-0491-6" target="_blank" >10.1186/s12859-015-0491-6</a>

Result language

angličtina

Original language name

histoneHMM: Differential analysis of histone modifications with broad genomic footprints

Original language description

histoneHMM is a fast algorithm written in C++ and compiled as an R package. It runs in the popular R computing environment and thus seamlessly integrates with the extensive bioinformatic tool sets available through Bioconductor. This makes histoneHMM anattractive choice for the differential analysis of ChIP-seq data. Software is available from http://histonehmm.molgen.mpg.de

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EB - Genetics and molecular biology

OECD FORD branch

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Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2015

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

B M C Bioinformatics

ISSN

1471-2105

e-ISSN

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Volume of the periodical

16

Issue of the periodical within the volume

Feb 22

Country of publishing house

GB - UNITED KINGDOM

Number of pages

15

Pages from-to

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UT code for WoS article

000350370700001

EID of the result in the Scopus database

2-s2.0-84928751959