A Plan 9 port of DNArates, a program to compute site-specific rate of evolution.

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985831%3A_____%2F03%3A09033067" target="_blank" >RIV/67985831:_____/03:09033067 - isvavai.cz</a>

Result on the web

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DOI - Digital Object Identifier

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Result language

angličtina

Original language name

A Plan 9 port of DNArates, a program to compute site-specific rate of evolution.

Original language description

A Plan 9 port of CpG, Gary Olsen's (Department of Microbiology, University of Illinois, Urbana, Illinois) dnarates version 1.1.0 program. It reads a set of DNA sequences and a tree, and for that tree makes a maximum likelihood estimate of the rate of evolution at each site. This is done by taking the rate at each site as a separate parameter and maximizing the likelihood with respect to all those parameters. It is based in part on code from Joe Felsenstein's PHYLIP program DNAML. The program was portedby P. Čejchan to the Plan 9 Operating System from Bell Labs (Lucent). Source is ANSI-C and is free.

Czech name

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Czech description

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Type

A - Audiovisual production

CEP classification

DB - Geology and mineralogy

OECD FORD branch

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Project

<a href="/en/project/KSK6005114" target="_blank" >KSK6005114: Biodiversity and functions of ecological systems</a><br>

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2003

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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