Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985904%3A_____%2F20%3A00537813" target="_blank" >RIV/67985904:_____/20:00537813 - isvavai.cz</a>
Alternative codes found
RIV/60460709:41210/20:82216 RIV/46747885:24220/20:00007773
Result on the web
<a href="https://asep.lib.cas.cz/arl-cav/cs/csg/?repo=crepo1&key=69381729753" target="_blank" >https://asep.lib.cas.cz/arl-cav/cs/csg/?repo=crepo1&key=69381729753</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1099/ijsem.0.004378" target="_blank" >10.1099/ijsem.0.004378</a>
Alternative languages
Result language
angličtina
Original language name
Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)
Original language description
A fructose-6-phosphate phosphoketolase-positive strain (GSD1FS(T)) was isolated from a faecal sample of a 3 weeks old German Shepherd dog. The closest related taxa to isolate GSD1FS(T) based on results from the EZBioCloud database were Bifidobacterium animalis subsp. animalis ATCC 25527(T), Bifidobacterium animalis subsp. lactis DSM 10140(T) and Bifidobacterium anseris LMG 30189(T), belonging to the Bifidobacterium pseudolongum phylogenetic group. The resulting 16S rRNA gene identities (compared length of 1454 nucleotides) towards these taxa were 97.30, 97.23 and 97.09%, respectively. The pairwise similarities of strain GSD1FS(T) using argS, atpA, fusA, hsp60, pyrG, rpsC, thrS and xfp gene fragments to all valid representatives of the B. pseudolongum phylogenetic group were in the concatenated range of 83.08-88.34%. Phylogenomic analysis based on whole-genome methods such as average nucleotide identity revealed that bifidobacterial strain GSD1FS(T) exhibits close phylogenetic relatedness (88.17%) to Bifidobacetrium cuniculi LMG 10738(T). Genotypic characteristics and phylogenetic analyses based on nine molecular markers, as well as genomic and comparative phenotypic analyses, clearly proved that the evaluated strain should be considered as representing a novel species within the B. pseudolongum phylogenetic group named as Bifidobacterium canis sp. nov. (GSD1FS(T)=DSM 105923(T)=LMG 30345(T)=CCM 8806(T)).
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
—
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2020
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
International Journal of Systematic and Evolutionary Microbiology
ISSN
1466-5026
e-ISSN
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Volume of the periodical
70
Issue of the periodical within the volume
9
Country of publishing house
GB - UNITED KINGDOM
Number of pages
8
Pages from-to
5040-5047
UT code for WoS article
000577279800027
EID of the result in the Scopus database
2-s2.0-85091717602