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Lensless coherent imaging of proteins and supramolecular assemblies: Efficient phase retrieval by the charge flippingalgorithm

Result description

Diffractive imaging using the intense and coherent beam of X-ray free-electron lasers opens new perspectives for structural studies of single nanoparticles and biomolecules.Simulations were carried out to generate 3D oversampled diffraction patterns of non-crystalline biological samples,ranging from peptides and proteins to megadalton complex assemblies,and to recover their molecular structure from nanometer to near-atomic resolutions.Using these simulated data,we show here that iterative reconstructionmethods based on standard and variant forms of the charge flipping algorithm,can efficiently solve the phase retrieval problem and extract a unique and reliable molecular structure.

Keywords

coherent imagingphase retrievalsingle particlecharge flippingX-ray free-electron lasers

The result's identifiers

Alternative languages

  • Result language

    angličtina

  • Original language name

    Lensless coherent imaging of proteins and supramolecular assemblies: Efficient phase retrieval by the charge flippingalgorithm

  • Original language description

    Diffractive imaging using the intense and coherent beam of X-ray free-electron lasers opens new perspectives for structural studies of single nanoparticles and biomolecules.Simulations were carried out to generate 3D oversampled diffraction patterns of non-crystalline biological samples,ranging from peptides and proteins to megadalton complex assemblies,and to recover their molecular structure from nanometer to near-atomic resolutions.Using these simulated data,we show here that iterative reconstructionmethods based on standard and variant forms of the charge flipping algorithm,can efficiently solve the phase retrieval problem and extract a unique and reliable molecular structure.

  • Czech name

  • Czech description

Classification

  • Type

    Jx - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    BM - Solid-state physics and magnetism

  • OECD FORD branch

Result continuities

  • Project

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2013

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Journal of Structural Biology

  • ISSN

    1047-8477

  • e-ISSN

  • Volume of the periodical

    182

  • Issue of the periodical within the volume

    2

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    11

  • Pages from-to

    106-116

  • UT code for WoS article

    000318391100006

  • EID of the result in the Scopus database