Acinetobacter pragensis sp nov., found in soil and water ecosystems
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F75010330%3A_____%2F16%3A00011560" target="_blank" >RIV/75010330:_____/16:00011560 - isvavai.cz</a>
Result on the web
<a href="http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.001285" target="_blank" >http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.001285</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1099/ijsem.0.001285" target="_blank" >10.1099/ijsem.0.001285</a>
Alternative languages
Result language
angličtina
Original language name
Acinetobacter pragensis sp nov., found in soil and water ecosystems
Original language description
This study aimed to define the taxonomic status of a novel, phenetically distinct group of seven strains belonging to the genus Acinetobacter, which were isolated from environmental soil and water samples collected in Central Bohemia, Czech Republic. Comparative sequence analyses of the 16S rRNA, gyrB and rpoB genes showed that all these strains formed respective tight clusters ( intracluster sequence similarities of at least 99.8, at least 98.1 and at least 98.3 %, respectively), which were distant from all known Acinetobacter species (at most 98.2, at most 84.0 and at most 88.9 %, respectively). The average nucleotide identity and digital DNA-DNA hybridization values (at most 83.5 and at most 27.4 %, respectively) between the whole-genome sequence of a group representative (strain ANC 4149(T)) and those of known taxa were far below the thresholds used to discriminate between bacterial species. The seven strains also formed a tight and distinct cluster based on the genus-wide comparison of whole-cell mass fingerprints generated by matrix-assisted laser desorption/ionization time-of-flight MS and could be distinguished from all other members of the genus Acinetobacter by the combination of their ability to assimilate glutarate and L-tartrate and inability to grow at 37 degrees C and on L-aspartate. It is concluded that the seven strains represent a novel species for which the name Acinetobacter pragensis sp. nov. is proposed. The type strain is ANC 4149(T) (= CCM 8637(T) = CCUG 67962(T) = CNCTC 7530(T)).
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EE - Microbiology, virology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/GA13-26693S" target="_blank" >GA13-26693S: Genetic diversity and phylogeny of the genus Acinetobacter in natural ecosystems.</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2016
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
International Journal of Systematic and Evolutionary Microbiology
ISSN
1466-5026
e-ISSN
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Volume of the periodical
66
Issue of the periodical within the volume
Pt. 10
Country of publishing house
GB - UNITED KINGDOM
Number of pages
7
Pages from-to
3897-3903
UT code for WoS article
000386871600022
EID of the result in the Scopus database
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