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Strain "Acinetobacter mesopotamicus" GC2 does not represent a novel species, but belongs to the species Acinetobacter lwoffii as revealed by whole-genome sequence-based analysis

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F75010330%3A_____%2F21%3A00013480" target="_blank" >RIV/75010330:_____/21:00013480 - isvavai.cz</a>

  • Alternative codes found

    RIV/00216208:11130/21:10416972

  • Result on the web

    <a href="https://link.springer.com/article/10.1007/s00284-020-02275-x" target="_blank" >https://link.springer.com/article/10.1007/s00284-020-02275-x</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s00284-020-02275-x" target="_blank" >10.1007/s00284-020-02275-x</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Strain "Acinetobacter mesopotamicus" GC2 does not represent a novel species, but belongs to the species Acinetobacter lwoffii as revealed by whole-genome sequence-based analysis

  • Original language description

    The formal scientific name "Acinetobacter mesopotamicus" has recently been proposed for bacterial strain GC2 isolated from soil (Curr Microbiol 77:3192-3200). However, the recalculation of the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) parameters revealed that their values for the genome sequences of GC2 and Acinetobacter lwoffii NCTC 5866(T) were as high as 95.7% and 66.1%, respectively. Moreover, the ANI and dDDH values for the genome of GC2 tested against those of 10 reference strains of A. lwoffii were 95.5-96.7% and 65.5-74.2%, respectively, and fall within the intraspecies range of these values known for A. lwoffii. These data indicate that strain GC2 belongs to A. lwoffii and contradicts the results of the authors of the proposal, who found the ANI and dDDH values for the GC2 and A. lwoffii DSM 2403(T) genomes to be 88.87% and 36.1%, respectively. The misclassification of strain GC2 is likely to result from the use of an incorrect reference genome sequence for in silico comparative analyses.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    30303 - Infectious Diseases

Result continuities

  • Project

  • Continuities

    V - Vyzkumna aktivita podporovana z jinych verejnych zdroju

Others

  • Publication year

    2021

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Current Microbiology

  • ISSN

    0343-8651

  • e-ISSN

    1432-0991

  • Volume of the periodical

    78

  • Issue of the periodical within the volume

    1

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    2

  • Pages from-to

    369-370

  • UT code for WoS article

    000585984000001

  • EID of the result in the Scopus database

    2-s2.0-85094947274